Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790908.1_cds_XP_016504474.1_1700

CDS Infomation

[gene=LOC107822421] [db_xref=GeneID:107822421] [protein=DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X3] [protein_id=XP_016504474.1] [location=complement(join(38496..38531,39183..39252,39314..39384,39670..39810,39887..39985,40296..40379,41773..41829,41932..42021,42131..42271,43353..43457,44783..44935,45040..45141,45233..45379,45720..45903,46016..46098,47493..47558,47737..47794,48468..48568,50979..51065,51491..51613,52431..52510,53090..53272,53888..53999,58346..58564,59351..59742,59814..59967,60397..60450,61007..61200,61305..61407,61565..61843))] [gbkey=CDS]

Sequence

ATGGCACCGAAGAAGAAGAAACCTCAATCATCCTCATCCAAAGGCAAAGCTTCTTCTTCT
TCCACTGGTCCCAAATTGCAAATATCTGCCGAGAACGAGAACCGGCTCCGACGGCTGCTG
CTTAATTCCAGCCGGTCTACACAATCTCCAGCTCCAATTCCGGCAGAGGATGCTCTCTCT
AAAGCACAGAAGGCCAAGAAACTTCGTTCTATTTACGAAAAGCTCTCTTGCGAGGGCTTT
TCCGACGATCAAATCGAACGCGCTTTATCCGCTCTCAAGGAGAGAGCTACGTTTGAAGCT
GCTTTAGATTGGCTATGCTTGAATTTGCGAGGGAATGAGCTTCCTCTGAAGTTTTCCAGT
GGTACTTCTCAATTGAATGAAGGTTCTGTTGGTGTCATATCAACTGCTCGAGAAGATTGG
GTTCCTTCAGCAGATTCATCTGTGGCAGAAGTTAAAGATGAGAGAAAGCCTGAAGTTTCA
GTTGTGCCGAAGGGTCGAAGTGATAGTGAGTCTCTACGTACAGTCGAACGTGCACAAGCA
GATTGGATCCGTCAGTATATGGAACAACAGGAAGAGGATGAAGCTGAAAGTTGGGAATCT
GGTTTGTTTGACGATGGTTCCCTAGAGCAGGCCTCGCGAAAAAGGCGTAGTATTGAGTCT
ATTGTCCAAGAATTTCATAATGCAAGGCTGGAAGCTATTCATGCAAAAGAGCGTGGTGAC
AAAAAGAGCCATGAACAAGCTAGCCGAACCATTCGGAAGATCAAGCAGGAGATATCTGCT
CTAGGACTACCGGATGATATCCTGGAATCTGCACATGAAAGTGCTTCCGACCATGCAGTG
TTGGACACATCTTCAGAGAAGCTTGATGTTGATAATGTTCCTTCACACAATTTCAGAACG
TCAACTACTCATGAACAGGAGATCGGAATTGATGAAAAGGTGGCTGTCAATAGCAGTTCC
AATGAGTTCACTGAAAACAATCCATCAAGTGGTCCTATAGATGATAAGGTGGCTCCAGGA
GGAGAAGCAGAAGACGTAGAGCTTGGTGATTTCTTATTTGAAGAAGTTTCCTCTGCTGAT
GTGTCATCTACGATACTAGAACTGCAGAAGAAAGAAAAGATGAGAGAATTATGTAGTCAG
AAAAACTTAGAGAAGTTAGAAGGTATATGGAAAAAGGGAGATCCACAAAAGATTCCAAAA
GCTTTTCTTCACCAACTTTGTCAAAGATCAGGGTGGGAGGCACCAAAATATGCGAAAATA
CCTGGAAAAGGAAATAATTCACATTACACTGTTAGTATAATGCGAAAAGCCAGTGGGAGG
GGTAAGAGCAGAAAAGCTGGAGGGCTAGTAACAATCGAGCTTCCTAGTCAGGATCATACT
TCTTCTACTACTGAGGATGCACAAAACAGAGTTGCAGCCTATGCTCTCCATCGCTTGTTT
CCAGATCTCCCAGTTCACATGCCAATTACTGAGCCATATGCATCACTTATTTTGCAGTGG
GAGGAAGGTGATTCCGTGATAGATATAGTGGATGATCAAGTGGAACGAAGGGCCTATTTC
GTGGATTCATTACTAGATACCAGCGGTTCTGAAAACATAACTCATTGTGATGTCTCCAAT
AATGCTAGTGATGAAAAGTTTTTAGAGCCTCACGCCACTGAAGATAAAACAGCAATTGCT
GATTTTACAGACAGAAACCCAAGTAAAGAAGCAGAAAGTTTCTCTCTGAAAAAGGAGCAA
GAGGGTAGAAAGAAGTTAAAGAAGTACCAGGAAATGTTGAAATCACGGGCTGCCCTTCCT
ATTGCTGACTTAAAAGGCAAGATTCTGCATTCACTGGAGGAGAATGATGTTTTGGTCATT
TGTGGGGAAACAGGTTGCGGGAAAACAACTCAGGTCCCTCAATTTATACTGGATGACATG
ATTGAATCAGGATGTGGGGGACATTGTAACATTATATGCACACAACCAAGGAGAATCGCG
GCTATTTCAGTGGCTGAAAGAGTTGCTGATGAGCGTTGTGAATCTTCACCAGGTTCGAGT
GACTCCTTGGTTGGTTACCAAGTTCGCCTCGATAGTGCAAGGAATGAGAGAACAAAGCTC
CTCTTTTGTACAACTGGCATTCTTTTGAGAATGTTTTCAGGAAATAAAAACTTGGCTGGT
GTTAGTCATATCATTGTTGATGAAGTCCATGAGAGGTCACTTCTGGGTGATTTTCTGCTC
ATTGTCTTGAAGAGTCTCATCCAGAAGCAATCTGCCCTTGGTACTGCAAAACTGAAAGTT
ATACTCATGTCTGCAACAGTAGATTCACATTTGTTTTCTCATTACTTCGGTCACTGCCCT
GTAATTACTGCTCAAGGCCGAACACATCCTGTTTCAACATATTTTCTCGAGGATATTTAT
GAGAGTACCAACTACCGCCTTGCATCCGATTCTCCTGCTTCTTTGAGCTATGGTACATCT
ACTAGGGAAAAGAATGCTCCTATTGGCAATCACAGGGGGAAGAAGAACCTTGTCCTATCT
GGATGGGGTGATGAATCGCTGCTCTCTGAAGAATATATTAATCCCTATTATGATCCCAGT
AATTATCAAAACTACAGCGAACAAACTCAAAAAAATTTGAGGAAATTGAATGAAGAAATT
ATTGATTATGATCTTCTCGAAGACCTGGTATGCTACATTGATGAAACATACCCGGAGGGT
GCTATACTGGTTTTCTTACCGGGGGTAGGAGAAATACATACCTTACTTGATAGACTGTCG
GTCTCCTTCCAGTTTAGTGGACAGTCTTCTGAATGGATTCTTCCTTTGCATTCTTCTGTA
GCATCCGAGGATCAGAAAAAAGTGTTTATGAGACCTCCGGAAAACATCCGTAAGGTTATA
ATAGCCACAAATATTGCAGAGACTAGCATAACCATAGATGATGTAGTTTATGTGGTAGAC
TGTGGAAAGCACAAAGAAAATCGCTATAATCCAAAGAAGAAATTGTCAAGCATGGTTGAA
GATTGGATATCTCAAGCAAATGCAAGGCAACGTCGAGGCAGAGCTGGACGTGTAAAGCCA
GGAATCTGCTTTTGTCTCTATACTTCTTACCGATATGAGAAGCTCATGCGACCTTACCAG
ATCCCGGAGATGCTGCGAATGCCTTTGGTAGAATTGTGCTTACAAATCAAACTGCTATCA
CTTGGAAGCATAAAGCTATTTTTGTCTATGGCTCTTGAACCTCCAAAGGATGAAGCTATT
GCGTCAGCAATTTCTTTATTGTATGAGGTTGGTGCCGTTGAAGGGGATGAAGAGTTAACT
CCTCTCGGGTATCATTTGGCGAGACTTCCTGTTGATGTGTTGGTTGGAAAGATGCTGTTA
TATGGTGGAGTATTTGGCTGTTTGTCACCAATTCTATCTATTTCAGCCTTCCTGAGTTAC
AAGTCTCCATTTGTTTATCCAAAAGATGAGAGGCAAAATGTTGAAAGAGCAAAGTTGGCA
CTTTTGAGTGATAAGCTTGGTGGTGAAACTGACTCTGGCAGTGGTAACTGGCAATCTGAC
CATCTCCTAATGATGGTAGCGTATAAAAAGTGGGAGAAAATTTTGCGGGAGAATGGAGTC
AAAGCAGCAAAGCAGTTTTGCAGTTCAAATTTCTTAAGCAGTTCTGTCATGTATATGATA
AGTGAATCTCAACAGATAACAACATTTTCTAAAGATTCTCTAACAAGGAAAGAATGTCCT
GTAGCCCTTGGGAGACATGAGAATACAATTTGGAACATTGTTAGCTGA

Peptide Sequence

PEP ID

XP_016504474.1

PEP Infomation

PREDICTED: DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X3 [Nicotiana tabacum]

Sequence

MAPKKKKPQSSSSKGKASSSSTGPKLQISAENENRLRRLLLNSSRSTQSPAPIPAEDALS
KAQKAKKLRSIYEKLSCEGFSDDQIERALSALKERATFEAALDWLCLNLRGNELPLKFSS
GTSQLNEGSVGVISTAREDWVPSADSSVAEVKDERKPEVSVVPKGRSDSESLRTVERAQA
DWIRQYMEQQEEDEAESWESGLFDDGSLEQASRKRRSIESIVQEFHNARLEAIHAKERGD
KKSHEQASRTIRKIKQEISALGLPDDILESAHESASDHAVLDTSSEKLDVDNVPSHNFRT
STTHEQEIGIDEKVAVNSSSNEFTENNPSSGPIDDKVAPGGEAEDVELGDFLFEEVSSAD
VSSTILELQKKEKMRELCSQKNLEKLEGIWKKGDPQKIPKAFLHQLCQRSGWEAPKYAKI
PGKGNNSHYTVSIMRKASGRGKSRKAGGLVTIELPSQDHTSSTTEDAQNRVAAYALHRLF
PDLPVHMPITEPYASLILQWEEGDSVIDIVDDQVERRAYFVDSLLDTSGSENITHCDVSN
NASDEKFLEPHATEDKTAIADFTDRNPSKEAESFSLKKEQEGRKKLKKYQEMLKSRAALP
IADLKGKILHSLEENDVLVICGETGCGKTTQVPQFILDDMIESGCGGHCNIICTQPRRIA
AISVAERVADERCESSPGSSDSLVGYQVRLDSARNERTKLLFCTTGILLRMFSGNKNLAG
VSHIIVDEVHERSLLGDFLLIVLKSLIQKQSALGTAKLKVILMSATVDSHLFSHYFGHCP
VITAQGRTHPVSTYFLEDIYESTNYRLASDSPASLSYGTSTREKNAPIGNHRGKKNLVLS
GWGDESLLSEEYINPYYDPSNYQNYSEQTQKNLRKLNEEIIDYDLLEDLVCYIDETYPEG
AILVFLPGVGEIHTLLDRLSVSFQFSGQSSEWILPLHSSVASEDQKKVFMRPPENIRKVI
IATNIAETSITIDDVVYVVDCGKHKENRYNPKKKLSSMVEDWISQANARQRRGRAGRVKP
GICFCLYTSYRYEKLMRPYQIPEMLRMPLVELCLQIKLLSLGSIKLFLSMALEPPKDEAI
ASAISLLYEVGAVEGDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISAFLSY
KSPFVYPKDERQNVERAKLALLSDKLGGETDSGSGNWQSDHLLMMVAYKKWEKILRENGV
KAAKQFCSSNFLSSSVMYMISESQQITTFSKDSLTRKECPVALGRHENTIWNIVS

Transcript Sequence

Gene sequence data has not been registered.